BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A11SP1|AL425629
(780 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1410 1507 0.0
>3x_Contig1410
Length = 7640
Score = 1507 bits (760), Expect = 0.0
Identities = 777/780 (99%), Gaps = 2/780 (0%)
Strand = Plus / Plus
Query: 1 gatctgtcattnggcaggttttctactacttatttcagcgctactgtccggataaaacac 60
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gatctgtcatt-ggcatgttttctactacttatttcagcgctactgtccggataaaacac 656
Query: 61 tgagatgcacagctgtcttatcacagtactcaaatctatccaccgctagtgtatctctcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgagatgcacagctgtcttatcacagtactcaaatctatccaccgctagtgtatctctcg 716
Query: 121 tgttagtgtgtttatatataccactaaagtcacagaagacacgaaatgtttattatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgttagtgtgtttatatataccactaaagtcacagaagacacgaaatgtttattatttat 776
Query: 181 cagaccctcacttaatcttcaacggctatatgtacagtccaattgaatacaaaacctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 cagaccctcacttaatcttcaacggctatatgtacagtccaattgaatacaaaacctctc 836
Query: 241 agagatagcaatccgtaaatatgcaactttgctttacctgccttacctaccgtgactctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 agagatagcaatccgtaaatatgcaactttgctttacctgccttacctaccgtgactctg 896
Query: 301 agaacactgttgccatccagtgttgctgtcgttcacgttctttcaaagcctttaacggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 agaacactgttgccatccagtgttgctgtcgttcacgttctttcaaagcctttaacggaa 956
Query: 361 atgtttcacattttctatataaagggactaaaaaggaaactacattgggaagacattatg 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 atgtt-cacattttctatataaagggactaaaaaggaaactacattgggaagacattatg 1015
Query: 421 gaacgaatgcaaacggataaagaaaggagaaaaggaaaatttgtgtgcttaaagttctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 gaacgaatgcaaacggataaagaaaggagaaaaggaaaatttgtgtgcttaaagttctac 1075
Query: 481 cactactgctaggaatctcaaacttgacaattgtagttacagtgctgtgctatcgaacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 cactactgctaggaatctcaaacttgacaattgtagttacagtgctgtgctatcgaacca 1135
Query: 541 aactagtttcataagcatcgattgtgtttacttttttgaggttttaaggtaaagatccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 aactagtttcataagcatcgattgtgtttacttttttgaggttttaaggtaaagatccaa 1195
Query: 601 ttagttaattctatcaacattatagagaattcgaaaatgtcacaaggcacattgtttgcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 ttagttaattctatcaacattatagagaattcgaaaatgtcacaaggcacattgtttgcg 1255
Query: 661 aatttccgtattagaacctggttacctcgcgcaattgtgaaaagcttgagtttggacgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 aatttccgtattagaacctggttacctcgcgcaattgtgaaaagcttgagtttggacgtt 1315
Query: 721 aagatcttggagccagagagcaacgtagagtactggtctaagttgttcccattgaagaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1316 aagatcttggagccagagagcaacgtagagtactggtctaagttgttcccattgaagaaa 1375
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5491
Number of Sequences: 1807
Number of extensions: 5491
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 780
length of database: 10,358,551
effective HSP length: 16
effective length of query: 764
effective length of database: 10,329,639
effective search space: 7891844196
effective search space used: 7891844196
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)